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Problems when using the ERA Interim data

Added by Xiaoli Chi over 4 years ago

Dear all,

I met problems when i used the ERA Interim data to run the COSMO-CLM. I succeeded when i use the same run_int2lm by using the data of NCEP, but when i change the data into ERA Interim. I always got errors. The wrong message is like that

OPEN: ncdf-file: /work/bb0884/chi/input/ext/domain2016032117044.nc
00: CLOSING ncdf FILE
00: OPEN: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: CLOSING ncdf FILE
00: OPEN: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
18: forrtl: severe (174): SIGSEGV, segmentation fault occurred
18: Image PC Routine Line Source
18: int2lm.exe 0000000000884645 Unknown Unknown Unknown
18: int2lm.exe 0000000000882407 Unknown Unknown Unknown
18: int2lm.exe 000000000083C134 Unknown Unknown Unknown
18: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
18: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
18: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
18: libpthread.so.0 00007F536B9BB7E0 Unknown Unknown Unknown
18: int2lm.exe 000000000073BEB3 src_read_coarse_g 4195 src_read_coarse_grid.f90
18: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
18: int2lm.exe 00000000005315E1 MAIN__ 265 int2lm_org.f90
18: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
18: libc.so.6 00007F536B636D5D Unknown Unknown Unknown
18: int2lm.exe 000000000041E9E9 Unknown Unknown Unknown
00: forrtl: severe (174): SIGSEGV, segmentation fault occurred
00: Image PC Routine Line Source
00: int2lm.exe 0000000000884645 Unknown Unknown Unknown
00: int2lm.exe 0000000000882407 Unknown Unknown Unknown
00: int2lm.exe 000000000083C134 Unknown Unknown Unknown

The error message and run_int2lm script are in the attachment.

Thank you for your help.

Best
Xiaoli

run_int2lm run_int2lm 3.31 KB run_int2lm
sp_int2lm.o2158263 sp_int2lm.o2158263 33.7 KB sp_int2lm.o2158263

Replies (8)

RE: Problems when using the ERA Interim data - Added by Merja Tölle over 4 years ago

This error is not very instructive, but if you set irefatm =1 in &LMGRID, it should work.
Cheers,
Merja

RE: Problems when using the ERA Interim data - Added by Xiaoli Chi over 4 years ago

Thank you so much for your reply.

I setted the irefatm =1 in &LMGRID, but unfortunately it didn’t work. I just put the new error and one data file in the attachment.

OPEN: ncdf-file: /work/bb0884/chi/input/ext/domain2016032117044.nc
00: CLOSING ncdf FILE
00: OPEN: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: CLOSING ncdf FILE
00: reference_atmosphere: calculate t0, p0, ... by averaging
07: reference_atmosphere: calculate t0, p0, ... by averaging
17: reference_atmosphere: calculate t0, p0, ... by averaging
11: reference_atmosphere: calculate t0, p0, ... by averaging
21: reference_atmosphere: calculate t0, p0, ... by averaging
23: reference_atmosphere: calculate t0, p0, ... by averaging
08: reference_atmosphere: calculate t0, p0, ... by averaging
15: reference_atmosphere: calculate t0, p0, ... by averaging
16: reference_atmosphere: calculate t0, p0, ... by averaging
01: reference_atmosphere: calculate t0, p0, ... by averaging
19: reference_atmosphere: calculate t0, p0, ... by averaging
02: reference_atmosphere: calculate t0, p0, ... by averaging
05: reference_atmosphere: calculate t0, p0, ... by averaging
04: reference_atmosphere: calculate t0, p0, ... by averaging
09: reference_atmosphere: calculate t0, p0, ... by averaging
10: reference_atmosphere: calculate t0, p0, ... by averaging
18: reference_atmosphere: calculate t0, p0, ... by averaging
13: reference_atmosphere: calculate t0, p0, ... by averaging
20: reference_atmosphere: calculate t0, p0, ... by averaging
12: reference_atmosphere: calculate t0, p0, ... by averaging
22: reference_atmosphere: calculate t0, p0, ... by averaging
06: reference_atmosphere: calculate t0, p0, ... by averaging
14: reference_atmosphere: calculate t0, p0, ... by averaging
03: reference_atmosphere: calculate t0, p0, ... by averaging
00: OPEN: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: forrtl: severe (174): SIGSEGV, segmentation fault occurred
00: Image PC Routine Line Source
00: int2lm.exe 0000000000884645 Unknown Unknown Unknown
00: int2lm.exe 0000000000882407 Unknown Unknown Unknown
00: int2lm.exe 000000000083C134 Unknown Unknown Unknown
00: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
00: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
00: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
00: libpthread.so.0 00007FB79BC787E0 Unknown Unknown Unknown
00: int2lm.exe 000000000073BEB3 Unknown Unknown Unknown
00: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
00: int2lm.exe 00000000005315E1 MAIN__ 265 int2lm_org.f90
00: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
00: libc.so.6
00: 00007FB79B8F3D5D Unknown Unknown Unknown
00: int2lm.exe 000000000041E9E9 Unknown Unknown Unknown
01: forrtl: severe (174): SIGSEGV, segmentation fault occurred
01: Image PC Routine Line Source
01: int2lm.exe 0000000000884645 Unknown Unknown Unknown
01: int2lm.exe 0000000000882407 Unknown Unknown Unknown
01: int2lm.exe 000000000083C134 Unknown Unknown Unknown
01: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
01: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
01: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
01: libpthread.so.0 00007F5ACCD927E0 Unknown Unknown Unknown
01: int2lm.exe 000000000073BEB3 Unknown Unknown Unknown
01: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
01: int2lm.exe 00000000005315E1 Unknown Unknown Unknown
01: int2lm.exe 000000000041EB0E Unknown Unknown Unknown

best
Xiaoli

RE: Problems when using the ERA Interim data - Added by Merja Tölle over 4 years ago

You do not need east_add_in=1,
Cheers,
Merja

RE: Problems when using the ERA Interim data - Added by Merja Tölle over 4 years ago

Also comment out lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE.,
Cheers,
Merja

RE: Problems when using the ERA Interim data - Added by Merja Tölle over 4 years ago

Also your startlat_tot = -7.89, startlon_tot = -11.89,
seem not to be correct.
Cheers,
Merja

RE: Problems when using the ERA Interim data - Added by Xiaoli Chi over 4 years ago

I deleted the east_add_in=1 and got the same segmentation error as before. I cannot comment out the lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE. although. If i did this, i got the new error message.
------------------------------------------------------------
00: * PROGRAM TERMINATED BECAUSE OF ERRORS DETECTED
00: * IN ROUTINE: int2lm_org
00:
00: * ERROR CODE is 1002
00: * ERROR
Wrong values occured in NAMELIST input
00: *----------------------------------------------------------

00: --------------------------------------------------------------------------
00: MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
00: with errorcode 1002.
00:
00: NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
00: You may or may not see output from other processes, depending on
00: exactly when Open MPI kills them.
00: --------------------------------------------------------------------------

Best
Xiaoli

RE: Problems when using the ERA Interim data - Added by Xiaoli Chi over 4 years ago

Thank you so much. It worked well.

Best
Xiaoli

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